Problem I’ve been going through some of the exercises over on exercism and this is one of my solutions: a […]
Tag: bioinformatics
Ruby command to edit a field in a SAM file
Problem Inspired by a bioinformatics question on Stack Overflow, I wanted to brush up on my Ruby knowledge, since I’ve […]
Rosalind problem “Consensus and Profile”
Problem Source: Rosalind(“Consensus and Profile”) Brief summary A T C C A G C T G G G C A […]
Compare a sequence with the reference frequency of hexamers
Problem I have written this function (and others similar to that one) But I am not sure I am using […]
Data processing task for bioinformatics
Problem I threw together this C program today to handle a bioinformatics data processing task. The program seems to work […]
bash script for constructing RNA pipeline
Problem I have written a bash script that consists of multiple commands and Python scripts. The goal is to make […]
Counting nucleobases in a nucleotide
Problem This question is part of a series solving the Rosalind challenges. For the previous question in this series, see […]
Converting domain-specific regular-expressions to a list of all matching instances
Problem There seem to be several questions floating around Stackexchange regarding how to take a python regular expression list the […]
Rosalind problem “Consensus and Profile”
Problem Source: Rosalind(“Consensus and Profile”) Brief summary A T C C A G C T G G G C A […]
RNA/DNA transcriber
Problem I’ve been going through some of the exercises over on exercism and this is one of my solutions: a […]
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